Simple Sequence Repeat (SSR) Fingerprint data for apples from the National Fruit Collection as used in Ordidge et al PLOS One 2018

Description

Data are simple sequence repeat (SSR) genetic fingerprints of the accessions in the apple collection of the National Fruit Collection, Brogdale, UK. The data are called and rounded allele scores, recorded by marker to the nearest base pair. The data represent a reproduction and update of the original SSR dataset from Fernandez-Fernandez F (2010) as detailed in the publication by Ordidge et al., 2018 (PLOS One). A number of alleles were adjusted based on either rescoring and/or recalling of the original data files using Genemapper software and/or reproduction of fingerprints following the original published protocols.

Resource Type:	Dataset
Creators:	Ordidge, Matt ORCID: https://orcid.org/0000-0003-0115-5218 and Venison, Edward ORCID: https://orcid.org/0000-0002-9943-6669
Contributors:	Fernandez-Fernandez, Felicidad
Rights-holders:	Department for Environment, Food and Rural Affairs
Data Publisher:	University of Reading
Publication Year:	2018
Data last accessed:	20 December 2024
DOI:	https://doi.org/10.17864/1947.163
Metadata Record URL:	https://researchdata.reading.ac.uk/id/eprint/163
Organisational units:	Life Sciences > School of Agriculture, Policy and Development > Department of Crop Science
Participating Organisations:	University of Reading, East Malling Research
Keywords:	National Fruit Collection, apple, genetic fingerprint, SSR
Rights:	Creative Commons Attribution 4.0 International
Data Availability:	OPEN
Additional details Additional details Project Name: The Long Term Housing, Maintenance and Scientific Curation of the National Fruit Collections Funders: Department for Environment, Food and Rural Affairs, UK Government (GC0147) Resource Language: English Data collection method: See Fernandez-Fernandez F. Fingerprinting the National apple and pear collections. Final report of the Defra research project GC0140. 2010. http://randd.defra.gov.uk/Document.aspx?Document=GC0140SID5FingerprintingFernandez.pdf and Ordidge et al. (PLOS One 2018) for updates. Depositing User: Dr Matt Ordidge Date Deposited: 15 Aug 2018 07:01 Last Modified: 13 Dec 2024 05:19