University of Reading Research Data Archive

Simple Sequence Repeat (SSR) Fingerprint data for apples from the National Fruit Collection as used in Ordidge et al PLOS One 2018

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Description

Data are simple sequence repeat (SSR) genetic fingerprints of the accessions in the apple collection of the National Fruit Collection, Brogdale, UK. The data are called and rounded allele scores, recorded by marker to the nearest base pair. The data represent a reproduction and update of the original SSR dataset from Fernandez-Fernandez F (2010) as detailed in the publication by Ordidge et al., 2018 (PLOS One). A number of alleles were adjusted based on either rescoring and/or recalling of the original data files using Genemapper software and/or reproduction of fingerprints following the original published protocols.

Resource Type: Dataset
Creators: Ordidge, Matthew, Venison, Edward
Contributors: Fernandez-Fernandez, Felicidad
Rights-holders: Department for Environment, Food and Rural Affairs, University of Reading
Data Publisher: University of Reading
Publication Date: 2018
Data last accessed: 26 October 2019
DOI: http://dx.doi.org/10.17864/1947.163
Metadata Record URL: https://researchdata.reading.ac.uk/id/eprint/163
Organisational units: Faculty of Life Sciences > School of Agriculture, Policy and Development > Biodiversity, Crops and Agroecosystems Division > Crops Research Group
Participating Organisations: University of Reading, East Malling Research
Keywords: National Fruit Collection, apple, genetic fingerprint, SSR
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