Simple Sequence Repeat (SSR) fingerprint data for apples from the National Fruit Collection as used in the article 'Microsatellite markers as a tool for active germplasm management and bridging the gap between national and local collections of apple'

Description

Data are simple sequence repeat (SSR) genetic fingerprints of the accessions in the apple collection of the National Fruit Collection, Brogdale, UK. The data are called and rounded allele scores, recorded by marker to the nearest base pair. A number of alleles were adjusted based on either rescoring and/or recalling of the original data files using Genemapper software and/or reproduction of fingerprints following the protocols as described in Venison et al. (2022), 'Microsatellite markers as a tool for active germplasm management and bridging the gap between national and local collections of apple', Genetic Resources and Crop Evolution (In Press).

Resource Type:	Dataset
Creators:	Venison, Edward ORCID: https://orcid.org/0000-0002-9943-6669 and Ordidge, Matt ORCID: https://orcid.org/0000-0003-0115-5218
Contributors:	Fernandez-Fernandez, Felicidad
Rights-holders:	Department for Environment, Food and Rural Affairs
Data Publisher:	University of Reading
Publication Year:	2022
Data last accessed:	20 November 2024
DOI:	https://doi.org/10.17864/1947.000351
Metadata Record URL:	https://researchdata.reading.ac.uk/id/eprint/351
Organisational units:	Life Sciences > School of Agriculture, Policy and Development > Department of Crop Science
Participating Organisations:	University of Reading, East Malling Research
Keywords:	National Fruit Collection, apple, genetic fingerprint, SSR
Rights:	Creative Commons Attribution 4.0 International
Data Availability:	OPEN
Additional details Additional details Project Name: The Long Term Housing, Maintenance and Scientific Curation of the National Fruit Collections Funders: Department for Environment, Food and Rural Affairs, UK Government (GC0147) Resource Language: English Data collection method: For data collection method see: Venison, E., Litthauer, S., Laws, P., Denancé, C., Fernández-Fernández, F., Durel, C.-E. and Ordidge, M. (2022) Microsatellite markers as a tool for active germplasm management and bridging the gap between national and local collections of apple. Genetic Resources and Crop Evolution. ISSN 0925-9864 (In Press) Depositing User: Dr Matt Ordidge Date Deposited: 18 Jan 2022 12:51 Last Modified: 12 Sep 2024 04:20

Available Versions of this Item

• Simple Sequence Repeat (SSR) Fingerprint data for apples from the National Fruit Collection as used in Ordidge et al PLOS One 2018. (deposited 15 Aug 2018 07:01)